SCIRun Installation Guide for Mac OS X

Short Description
on the Mac OS X platform. SCIRun may be installed from a tarball or built from source ….. The tutorial uses the previously down-. loaded sample data sets. …

Website: software.sci.utah.edu | Filesize: 100kb

Content
SCIRun Installation Guide for Mac
OS X
(v. 1.24.2)
Table of Contents
1. Introduction ……………………………………………………………………………………………… 1
2. Installation from a Binary Tarball ……………………………………………………………………. 3
2.1. Downloading …………………………………………………………………………………… 3
2.2. Installing SCIRun ……………………………………………………………………………… 3
2.3. SCIRun’s Sample Data Sets ………………………………………………………………….. 4
2.4. SCIRun’s Documentation …………………………………………………………………….. 4
3. Installation from Source Code ………………………………………………………………………… 5
3.1. Downloading and Unpacking Sources ……………………………………………………… 5
3.2. Building Internal Third Party Software …………………………………………………….. 7
3.3. Building External Thirdparty Software …………………………………………………….. 9
3.4. Building SCIRun ………………………………………………………………………………. 9
4. Before Starting SCIRun ……………………………………………………………………………… 11
4.1. Dynamic Compilation ………………………………………………………………………. 11
4.2. Accessing Data Sets …………………………………………………………………………. 12
5. Starting SCIRun ………………………………………………………………………………………. 13
6. Getting Help …………………………………………………………………………………………… 13
A. External Thirdparty Installation Instructions ……………………………………………………… 13
A.1. PETSc Installation ………………………………………………………………………….. 14
A.1.1. Introduction ………………………………………………………………………… 14
A.1.2. Download and Unpack ……………………………………………………………. 14
A.1.3. Build ………………………………………………………………………………… 15
A.1.4. SCIRun PETSc Configure Options ……………………………………………… 15
A.1.5. The SolveMatrix Module …………………………………………………………. 16
A.2. Insight Toolkit (ITK) Installation …………………………………………………………. 16
A.2.1. Introduction ………………………………………………………………………… 16
A.2.2. Obtaining ITK ……………………………………………………………………… 16
A.2.3. Building ITK ……………………………………………………………………….. 17
A.2.4. SCIRun Insight Configure Options ……………………………………………… 18
A.3. HDF5 Installation …………………………………………………………………………… 18
A.3.1. Download and Unpack ……………………………………………………………. 19
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